Communicating with Data
Presented by Emi Tanaka
School of Mathematics and Statistics
dr.emi.tanaka@gmail.com
@statsgen
4th October 2019 | COMBINE | Sydney, Australia
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Hi! I'm Emi! 👋
I'm a lecturer in statistics at The University of Sydney (soon moving to Monash University).
Introduce yourself to someone you don't know!
03:00
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HELP!
Please send SOS signal by attaching sticky note on your laptop.
Please help your neighbours 🙏
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Schedule
| Time | Activity |
|---|---|
| 1:00PM - 1:25PM | Session 1: R Markdown Basics |
| 1:25PM - 1:30PM | Break 🍵 |
| 1:30PM - 3:00PM | Session 2A: Reproducible Reports I |
| 3:00PM - 3:30PM | Afternoon Tea ☕🍰 |
| 3:30PM - 4:10PM | Session 2B: Reproducible Reports II |
| 4:10PM - 4:15PM | Break 🚽 |
| 4:15PM - 5:00PM | Session 3: Pretty Presentations |
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R Markdown Basics
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Knitting: Rmd md html
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Knitting: Rmd md pdf
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There are many other output formats possible with R Markdown via Pandoc.
Can you name another 3?
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R Markdown under the hood: html_document
knitr 📦 does the hard work of converting Rmd md
---title: "My Report"output: html_document---# Hello```{r}1 + 1```---title: "My Report"output: html_document---# Hello```r1 + 1``````## [1] 2```Rmd
md
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R Markdown under the hood: html_document
Then rmarkdown 📦 prepares md for pandoc to convert to html .
---title: "My Report"output: html_document---# Hello```r1 + 1``````## [1] 2```<body><div class="container-fluid main-container"><div class="fluid-row" id="header"><h1 class="title toc-ignore">My Report</h1></div><div id="hello" class="section level1"><h1>Hello</h1><pre class="r"><code>1 + 1</code></pre><pre><code>## [1] 2</code></pre></div></div></body> This html file is missing some elements due to restriction of space.
md
html
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R Markdown under the hood: pdf_document
Same as before: knitr 📦 converts Rmd md
---title: "My Report"output: pdf_document---# Hello```{r}1 + 1```---title: "My Report"output: pdf_document---# Hello```r1 + 1``````## [1] 2```Rmd
md
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R Markdown under the hood: pdf_document
Then rmarkdown 📦 prepares md for pandoc to convert to tex pdf .
---title: "My Report"output: html_document---# Hello```r1 + 1``````## [1] 2```\begin{document}\maketitle\hypertarget{hello}{%\section{Hello}\label{hello}}\begin{Shaded}\begin{Highlighting}[]\DecValTok{1} \OperatorTok{+}\StringTok{ }\DecValTok{1}\end{Highlighting}\end{Shaded}\begin{verbatim}## [1] 2\end{verbatim}\end{document}md
tex
This tex document is missing elements before
\begin{document} due to restriction of space.
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Get started with
challenge-01.Rmd
05:00
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Advanced question
How do you render different output formats at once?
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That's it!
These slides are made using xaringan R-package.
The workshop materials are licensed under 
.
Emi Tanaka
dr.emi.tanaka@gmail.com
@statsgen
Check that you can:
- Make a html document from .Rmd
- Make a pdf document from .Rmd
- Have some understanding of how R Markdown works under the hood.
- Have some understanding of how some R Markdown components works only in specific output formats.
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